<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "https://jats.nlm.nih.gov/nlm-dtd/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">NPG</journal-id>
<journal-title-group>
<journal-title>Nonlinear Processes in Geophysics</journal-title>
<abbrev-journal-title abbrev-type="publisher">NPG</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Nonlin. Processes Geophys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1607-7946</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/npg-20-1113-2013</article-id>
<title-group>
<article-title>Assessment of numerical schemes for solving the advection–diffusion equation on unstructured grids: case study of the Guaíba River, Brazil</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Pereira</surname>
<given-names>F. F.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Fragoso Jr.</surname>
<given-names>C. R.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Uvo</surname>
<given-names>C. B.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Collischonn</surname>
<given-names>W.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Motta Marques</surname>
<given-names>D. M. L.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Department of Water Resources Engineering, Lund University, Lund, Sweden</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Centro de Tecnologia, Universidade Federal de Alagoas, Maceió, Brazil</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Instituto de Pesquisas Hidráulicas, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil</addr-line>
</aff>
<pub-date pub-type="epub">
<day>17</day>
<month>12</month>
<year>2013</year>
</pub-date>
<volume>20</volume>
<issue>6</issue>
<fpage>1113</fpage>
<lpage>1125</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2013 F. F. Pereira et al.</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://npg.copernicus.org/articles/20/1113/2013/npg-20-1113-2013.html">This article is available from https://npg.copernicus.org/articles/20/1113/2013/npg-20-1113-2013.html</self-uri>
<self-uri xlink:href="https://npg.copernicus.org/articles/20/1113/2013/npg-20-1113-2013.pdf">The full text article is available as a PDF file from https://npg.copernicus.org/articles/20/1113/2013/npg-20-1113-2013.pdf</self-uri>
<abstract>
<p>In this work, a first-order upwind and a high-order flux-limiter schemes for
solving the advection–diffusion equation on unstructured grids were
evaluated. The numerical schemes were implemented as a module of an
unstructured two-dimensional depth-averaged circulation model for shallow
lakes (IPH-UnTRIM2D), and they were applied to the Guaíba River in
Brazil. Their performances were evaluated by comparing mass conservation
balance errors for two scenarios of a passive tracer released into the
Guaíba River. The circulation model showed good agreement with observed
data collected at four water level stations along the Guaíba River, where
correlation coefficients achieved values up to 0.93. In addition, volume
conservation errors were lower than 1% of the total volume of the
Guaíba River. For all scenarios, the higher order flux-limiter scheme has
been shown to be less diffusive than a first-order upwind scheme. Accumulated
conservation mass balance errors calculated for the flux limiter reached
8%, whereas for a first-order upwind scheme, they were close to 18%
over a 15-day period. Although both schemes have presented mass conservation
errors, these errors are assumed negligible compared with kinetic processes
such as erosion, sedimentation or decay rates.</p>
</abstract>
<counts><page-count count="13"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple">Blaise, S., Comblen, R., Legat, V., Remacle, J.-F., Deleersnijder, E., and Lambrechts, J.: A discontinuous finite element baroclinic marine model on unstructured prismatic meshes, Ocean Dynam., 60, 1371–1393, 2010.</mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple">Bokuniewicz, H., McTiernan, L., and Davis, W.: Measurement of Sediment Resuspension Rates in Long Island Sound, Geo-Mar. Lett., 11, 159–161, 1991.</mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple">Brönmark, C. and Hansson, L.-A.: The Biology of Lakes and Ponds, 2nd Edn., Oxford University Press, 2005.</mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple">Carrick, H. J., Aldridge, F. J., and Schelske, C. L.: Wind influences phytoplankton biomass and composition in a shallow productive lake, Limnol. Oceanogr., 36, 1179–1192, 1993.</mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple">Casulli, V.: Semi-implicit Finite Difference Methods for the Two-Dimensional Shallow Water Equations, J. Comput. Phys., 86, 56–74, 1990.</mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple">Casulli, V. and Cattani, E.: Stability, accuracy and efficiency of a semi-implicit method for three-dimensional shallow water flow, Comput. Math. Appl., 27, 99–112, 1994.</mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple">Casulli, V. and Cheng, R. T.: Semi-Implicit Finite Difference Methods for Three-Dimensional Shallow Water Flow, Int. J. Numer. Meth. Fluids, 15, 629–648, 1992.</mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple">Casulli, V. and Walters, R. A.: An Unstructured Grid, Three-Dimensional Model Based on the Shallow Water Equations, Int. J. Numer. Meth. Fluids, 32, 331–348, 2000.</mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple">Casulli, V. and Zanolli, P.: High resolution methods for multidimensional advection-diffusion problems in free-surface hydrodynamics, Ocean Model., 10, 137–151, 2005.</mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple">Chapra, S. C.: Surface water-quality modeling, McGraw-Hill, New York, USA, 2005.</mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple">Cheng, R. T. and Casulli, V.: Evaluation of the UnTRIM Model for 3-D Tidal Circulation., in: 7th International Conference on Estuarine and Coast Modelling, St. Petersburg, Florida, USA, 628–642, 2001.</mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple">Cheng, R. T., Casulli, V., and Gartner, J. W.: Tidal, Residual, Intertidal Mudflat (TRIM) Model and its Applications to San Francisco Bay, California, Estuarine, Coast. Shelf Sci., 36, 235–280, 1993.</mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple">Cotta, R. M.: Integral Transforms in Computational Heat and Fluid Flow, McGraw-Hill, CRC Press, Boca Raton, Florida, USA, 2005.</mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple">Escalante Estrada, M., Morales Pérez, R., and Vaquero, P. E.: Calibration of friction coefficients for a 3D hydrodynamic model, Environ. Hydraul., 1, 165–168, 2010.</mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple">Fox, R. W., McDonald, A. T., and Pritchard, P. J.: Introduction to Fluid Mechanics, John Wiley &amp; Sons Canada, Limited, &lt;a href=&quot;http://books.google.se/books?id=Bsg8PgAACAAJ&quot;&gt;http://books.google.se/books?id=Bsg8PgAACAAJ&lt;/a&gt; (last access: 14 April 2013), 2009.</mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple">Fragoso Jr., C. R., Motta Marques, D. M., Collischonn, W., Tucci, C. E. M., and van Nes, E. H.: Modelling spatial heterogeneity of phytoplankton in Lake Mangueira, a large shallow subtropical lake in South Brazil, Ecol. Model., 219, 125–137, 2008.</mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple">Fragoso Jr., C. R., van Nes, E. H., Jansen, J. H., and Motta Marques, D. M. L.: IPH-TRIM3D-PCLake: A three-dimensional complex dynamic model for subtropical aquatic ecosystems, Environ. Model. Softw., 24, 1347–1358, 2009.</mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple">French, R. H.: Open Channels Hydraulics, McGraw-Hill, Blacklick, Ohio, USA, 1986.</mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple">Gross, E. S., Kose, J. R., and Monismith, S. G.: Evaluation of advective schemes for estuarine salinity simulations., Journal of hydraulic engineering, 125, 32–46, 1999.</mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple">Gross, E. S., Bonaventura, L., and Rosatti, L.: Consistency with continuity in conservative advection schemes for free-surface models., International Journal of Numerical Methods in Fluids, 38, 307–327, 2002.</mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple">Guerrero, J. S. P., Pimentel, L. C. G., Skaggs, T. H., and van Genuchten, M. T.: Analytical solution of the advection-diffusion transport equation using a change-of-variable and integral transform technique, Int. J. Heat Mass Trans., 52, 3297–3304, 2009.</mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple">Heniche, M., Secretan, Y., Boudreau, P., and Leclerc, M.: A two-dimensional finite element drying-wetting shallow water model for rivers and estuaries, Adv. Water Resour., 23, 359–372, 2000.</mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple">Hetch, M. W., Holland, W. R., and Rasch, P. J.: Upwind-weighted advection schemes for ocean tracer transport: An evaluation in a passive tracer context, J. Geophys. Res., 20, 763–778, 1995.</mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple">Hill, D. C., Jones, S. E., and Prandle, D.: Derivation of sediment resuspension rates from acoustic backscatter time-series in tidal waters, Cont. Shelf Res., 23, 19–40, 2003.</mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple">Hirsch, C.: Numerical Computation of Internal and External Flows: The Fundamentals of Computational Fluid Dynamics, 2nd Edn., John Wiley and Sons, Burlington USA, 2007.</mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple">Hodges, B. and Dallimore, C.: Estuary, Lake and Coastal Ocean Model, 2nd Edn., ELCOM, Western Australia, Australia, 2013.</mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple">Leij, F. J. and van Genuchten, M. T.: Analytical modeling of nonaqueous phase liquid dissolution with Green&apos;s functions, Trans. Porous Media, 38, 141–166, 2000.</mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple">Le Veque, R. J.: High-resolution conservative algorithms for advection in incompressible flow, SIAM J. Numer. Anal., 33, 627–665, 1996.</mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple">Margolin, L. and Shashkov, M.: Using a Curvilinear Grid to Construct Symmetry-Preserving Discretizations for Lagrangian Gas Dynamics, J. Comput. Phys., 149, 389–417, 1999.</mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple">Mikhailov, M. D. and Ozisik, M. N.: Unified analysis and solutions of heat and mass diffusion, 1st Edn., Wiley Interscience, London, UK, 1984.</mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple">Moradkhani, H. and Hsu, K.-L.: Uncertainty assessment of hydrologic model states and parameters: Sequential data assimilation using the particle filter, Water Resour. Res., 41, 1–17, 2005.</mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple">Nielsen, P. and Skovgaard, O.: The effect of using non-orthogonal boundary-fitted grids for solving the shallow water equations, Int. J. Numer. Meth. Fluids, 11, 177–188, 2005.</mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple">Ogston, A. S. and Field, M. E.: Predictions of Turbidity Due to Enhanced Sediment Resuspension Resulting from Sea-Level Rise on a Fringing Coral Reef: Evidence from Molokai, Hawaii, J. Coast. Res., 26, 1027–1037, 2010.</mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple">Ogston, A. S., Storlazzi, C. D., Field, M. E., and Presto, M. K.: Sediment resuspension and transport patterns on a fringing reef flat, Molokai, Hawaii, Coral Reefs, 23, 559–569, 2004.</mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple">Pereira, F. F.: Modelo Hidrodinâmico e de transporte bidimensional de grade não estruturada para lagos rasos, Master&apos;s thesis, Instituto de Pesquisas Hidráulicas, Porto Alegre, RS, 2010.</mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple">Press, W. H., Tuskolsky, S. A., Vetterling, W. T., and Flannery, B. P.: Numerical Recipes in FORTRAN, 2nd Edn., Cambridge University, 1992.</mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple">Reynolds, C. S.: The ecology of freshwater phytoplankton, vol. 2, Cambridge University Press, 1984.</mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple">Rosauro, N. M. L.: A Finite Elements Application to the Study of Seiches and Water Circulation in the Jacuí Delta, Guaíba River and Patos Lagoon, Ph.D. thesis, Instituto de Pesquisas Hidráulicas, Porto Alegre, Brazil, 1982.</mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple">Samuel, J., Coulibaly, P., and Metcalfe, R. A.: Estimation of Continuous Streamflow in Ontario Ungauged Basins: Comparison of Regionalization Methods, J. Hydrol. Eng., 16, 447–459, 2011.</mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple">Sankaranarayanan, S. and Spaulding, M. L.: A study of the effects of grid non-orthogonality on the solution of shallow water equations in boundary-fitted coordinate systems, J. Comput. Phys., 184, 299–320, 2003.</mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple">Silveira, A. L. L.: Modelo hidrodinâmico bidimensional com aplicação ao rio Guaíba, Ph.D. thesis, Instituto de Pesquisas Hidráulicas, Porto Alegre, Brazil, 1986.</mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple">Stevenson, J. C., Kearney, M. S., and Pendleton, E. C.: Sedimentation and erosion in a chesapeake bay brackish marsh system, Mar. Geol., 67, 213–235, 1985.</mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple">Sweby, P. K.: High resolution schemes using flux limiters for hyperbolic conservation laws, SIAM J. Numer. Anal., 21, 995–2011, 1984.</mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple">TeCGraf: Manual do Usuário, Tech. Rep. 1, Grupo de Tecnologia em Computação Gráfica/PUC Rio, Rio de Janeiro, Brazil, 1992.</mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple">Thompson, J. E., Warsi, Z. U. A., and Mastin, C. W.: Numerical Grid Generation: Foundations and Applications, Elsevier Science Publishing Co., New York, USA, 1985.</mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple">Tucci, C. E. M., Silveira, A. L. L., and Sanchez, J.: Flow regionalization in the upper Paraguay basin, Brazil, Hydrolog. Sci. J., 40, 485–497, 1995.</mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple">Wang, B., Fringer, O. B., Gridding, S. N., and Fong, D. A.: High-resolution simulations of a macrotidal estuary using SUNTANS, Ocean Model., 26, 60–85, 2008.</mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple">Westerink, J. J., Blain, C. A., Luettich Jr., R. A., and Scheffner, N. W.: ADCIRC: An advanced three-dimensional circulation model for shelves, coasts and estuaries, Tech. Rep. 2, US Army Corps of Engineers Waterways Experiment Station, Mississippi, USA, 1994.</mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple">Wood, T. M., Cheng, R. T., Gartner, J. W., Hoilman, G. R., Lindenberg, M. K., and Wellman, R. E.: USGS Scientific Investigation: Modeling Hydrodynamics and Heat Transport in Upper Klamath Lake, Oregon, and Implications for Water Quality, Tech. Rep. 1, USGS, Denver, USA, 2008.</mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple">Ye, J. and McCorquodale, J. A.: Depth-averaged Hydrodynamic Model in Curvilinear Collocated Grid, J. Hydrol. Eng., 123, 380–388, 1997.</mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple">Zhang, Y. and Baptista, A. M.: SELFE: A semi-implicit Eulerian-Lagrangian finite-element model for cross-scale ocean circulation, Ocean Model., 21, 71–96, 2007.</mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple">Zhou, J. G.: Velocity-depth coupling in shallow water flows, J.Hydraul. Eng., 121, 717–724, 1995.</mixed-citation>
</ref>
</ref-list>
</back>
</article>